Overview of coffee genome (Coffea canephora L.) and its function in stress response and caffeine biosynthesis
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Đã Xuất bản:
Oct 31, 2022
Từ khóa:
Caffein, C. canephora, chromosome, miRNA, stress, nhân tố chuyển, transposable elements
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Overview of coffee genome (Coffea canephora L.) and its function in stress response and caffeine biosynthesis
Tóm tắt
Coffea canephora, a coffee species belonging to the Rubiaceae family, is one of the most popular cultivated coffee worldwide. In this study, we overview some important aspects of the genetic genome in C. canephora and also review the candidate genes that involve biotic and abiotic stress response and caffeine biosynthesis in the Coffea genome. It is reported that the C. canephora genome consists of 25,574 protein-coding genes, 2,573 organellar-to-nuclear genome transfers, 6,812 predicted transposable elements (TEs), and 92 microRNA precursors. Coffee-caffeine is synthesized from xanthosine via three methylation steps by NMT genes in C. canephora genome: NMT2: cc02_g09350; DXMT: cc01_g00720; XMT: cc09_g06970; MXMT: cc00_g24720; NMT3: cc09_g06960; MTL: cc09_g06950. C. canephora genome sequence has recently become a new tool for investigating and analyzing coffee resistance and quality at the molecular level.
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